Seqera

We just released Episode 41 of the 🎙️ #Channels #Podcast! In this episode, join Phil Ewels and Ben Sherman from Seqera as they dive deep into the latest and greatest updates in #Nextflow 24.04. Here’s what you can expect to learn: - 🎯 New topic channels: Streamline data collection across your pipeline. - 🛠️ Eval outputs: Simplify and enhance your process definitions. - 🔄 Workflow output definitions: Replacing "publishDir" for cleaner and more manageable outputs. These features are designed to enhance your workflow and make your Nextflow experience better than ever. We’re inviting the #Nextflow community to try these new features and share your feedback with us. Your input is crucial in shaping the future of Nextflow! Don't miss out on this insightful episode. Tune in now and be part of the conversation.. #DataScience #Bioinformatics #WorkflowAutomation #Podcast #TechUpdates

🎥✨ The #NextflowSummit in Boston was an opportunity to see the entire #Nextflow and nf-core community unite in the spirit of open science and advancing science for everyone through software. 🧬 We had many highlights, including Ginkgo Bioworks, Inc.'s insightful talk on how the Seqera platform has accelerated genetic database development for natural product discovery and protein optimization. We also publicly announced several product updates, including Seqera Data Studios, Seqera Compute, Seqera Containers and Seqera Pipelines. 🤩 🚀 What's great is that we're back in Barcelona in October for the biggest #NextflowSummit to date, where you can network, learn, and collaborate with top experts in the field. Stay tuned as we reveal our lineup of speakers! Register now to secure your spot and enjoy a 20% discount: https://lnkd.in/d-7r6Rkj

At Seqera, we are on a mission to advance science for everyone through software and we cannot forget that science is developed by everyone, for everyone. On this #PrideDay 🏳️🌈, we want to celebrate the groundbreaking contributions of LGBTQ+ scientists that have driven progress in science and technology. 🔬 Dr. Ben Barres, who uncovered the crucial role of neuroglia in the nervous system 🔌 Dr. Lynn Conway, a pioneer in microelectronics and VLSI design 🏥 Dr. Sara Josephine Baker, whose innovations in public health continue to save lives. To all LGBTQ+ scientists out there, we thank you for the work you have done and are doing to advance science for everyone. Only by truly embracing diversity, we can drive innovation and create a better future for everyone. 🌈

We just had a #SeqeraSessions in Basel 🇨🇭 and it was great seeing so many of our community — a fantastic blend of learning, collaboration, and networking. 🚀 The event started with a #Nextflow training, where attendees from Boehringer Ingelheim, Novigenix SA, Roche, and other companies learned how to make the most of Nextflow for their workflow management needs. 🎤 In the afternoon, we had Alexander Peltzer, Hamid Azimi, Cameron MacPherson and Evan Floden share their insights about AI and open science, before a lively networking session, building valuable connections. Interested in leveling up your Nextflow skills? The next #SeqeraSessions is coming up in Cambridge 🇬🇧 in September. Stay tuned as registrations will open soon!

Join us to hear Phil Ewels chat with Maxime Garcia and Franziska Bonath about how nf-core started at the National Genomics Infrastructure (NGI) at SciLifeLab in Sweden, and how the nf-core/sarek pipeline grew alongside and eventually joined nf-core!

Cristina Tuñí i Domínguez, a Nextflow Ambassador, shares her experience in "Reflecting on a Six-Month Collaboration." For over six months, Cristina and a PhD student in metagenomics bridged bioinformatics and microbial ecosystems, enriching their research. With the support of the Nextflow community, they overcame computational challenges and pipeline errors, leading to significant growth and rewarding outcomes. 📈💡 Cristina’s post highlights the power of interdisciplinary collaboration and community support. Join the Nextflow community, engage, and achieve great things together! 🌐✨ 👉 Read more here: https://lnkd.in/dMiJGADN #Nextflow #nfcore #Bioinformatics #Metagenomics #Collaboration #ScienceCommunity

🔍 Behind the scenes with Ben Sherman, PhD! Ever wondered what drives innovation at Seqera? Ben, one of our Senior Software Engineers behind #Nextflow, takes you behind the scenes, sharing his passion for technology and how Seqera fosters an environment where every idea counts. Don’t miss this insider’s perspective! Ready to join us and define a new era in data analysis together? Don't miss out – come be a part of something extraordinary at Seqera! 🚀 #BehindTheScenes #TeamSeqera #JoinUs #jobopportunity 🌟 https://seqera.io/careers/

Last week, the entire Seqera team flew in from around the globe to Barcelona for an inspiring and unforgettable retreat 🌎 As an international remote company, it is so valuable to come together, strengthen our connections, and spark new ideas. Throughout the week, we engaged in dynamic workshops and sessions across our diverse teams, working hard toward our mission of advancing science for everyone through software. Of course, it wasn't all business! 🎢 Evenings were spent enjoying conversations, and we capped off our week with a fun day at Port Aventura Park. This retreat not only strengthened our team but also unveiled Seqera's ambition to become the Home of #OpenScience which will drive even more exciting growth and innovation.💡 We are expanding rapidly come join us on our mission! 👉 Explore opportunities here: https://seqera.io/careers/

🚀 We're thrilled to see the global impact of Nextflow in bioinformatics! 🌍 Our Ambassador Kübra NARCI, PhD is championing its adoption in Türkiye. The first online workshop with ISCB SC RSG Türkiye was a success, and we’re excited about what is to come! 🇹🇷 #Nextflow #Bioinformatics Kübra is a bioinformatician with The German Human Genome-Phenome Archive (GHGA) and has seen firsthand the power of Nextflow. From initial challenges to community contributions, her journey has led her to become a Nextflow Ambassador. Read more about it in the blog post below. https://lnkd.in/eXJF9YXr

Tune in to hear all about Pixelgen Technologies - creators of a novel technology for doing single-cell spatial proteomics. We chat about how this fascinating technology works, what you can do with the data and why they chose to develop their analysis suite as an open-source nf-core pipeline. Links: - Software: - nf-core/pixelator pipeline: https://nf-co.re/pixelator - Pixelator Python package: https://lnkd.in/dYNp95jv - Science: - Nature Methods publication: https://lnkd.in/depdihwJ - Presentations: - Nextflow Summit 2022 talk: https://lnkd.in/dxVBeHgm - Nextflow Summit 2024 Boston talk: https://lnkd.in/dCgMNVNA - Pixelgen: - Pixelgen Technologies homepage: https://www.pixelgen.com/ - @PixelgenTech on twitter / X: https://x.com/PixelgenTech - Pixelgen Technologies on LinkedIn: https://lnkd.in/dUcc9_jM - BioLizard: - BioLizard homepage: https://lizard.bio/ - @BioLizard_nv on twitter / X: https://x.com/BioLizard_nv - BioLizard on LinkedIn: https://lnkd.in/em2NwHFM