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Series GSE242839 Query DataSets for GSE242839
Status Public on Jul 19, 2024
Title PD-1 is induced on tumor-associated macrophages in obesity to directly restrain anti-tumor immunity
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Obesity is a leading risk factor for progression and metastasis of many cancers1,2, yet can also promote improved survival for some cancers3-5 and enhance responses to some immune checkpoint blockade therapies6-8. The role of the immune system in the obesity-cancer connection and how obesity influences immunotherapy, however, remain unclear. While PD-1 expression by macrophages has been described9-12, we found that obesity selectively induced PD-1 on macrophages and that PD-1 directly impaired macrophage function. Single cell RNA sequencing of murine colorectal carcinoma tumors showed obesity remodeled myeloid and T cell populations, with fewer clonally expanded effector T cells and increased abundance of PD-1+ tumor-associated macrophages (TAM). Cytokines and molecules associated with obesity, including IL-6, leptin, and insulin, and the unsaturated fatty acid palmitate, induced PD-1 expression on macrophages in a glycolysis-dependent manner and that MTORC1 pathway signaling is essential for PD1 expression. PD-1+ TAMs had increased mitochondrial respiration, fatty acid metabolism and cell cylewhile PD-1- TAMs had increased inflammatory signature , phagocytosis and antigen presentation to T cells. These patterns were directly regulated by PD-1, as recombinant PD-L1 reduced macrophage glycolysis, phagocytic capacity and antigen presentation, and this was reversed with blocking PD-1 antibody. Further, inhibition of glycolysis with 2-deoxyglucose prevented the increase in CD86, MHC-I and MHC-II that would otherwise occur with anti-PD-1 treatment. Conversely, PD-1-deficient Pdcd1-/- TAMs had high rates of glycolysis, phagocytosis, and expression of MHC-II. Myeloid-specific PD-1 deficiency correlated with slower tumor growth, enhanced TAM antigen presentation capability, and increased CD8 T cell activation together with reduced markers of exhaustion. These findings show metabolic signaling and type 1 inflammatory cues in obesity induces PD-1-mediated suppression of TAM function and reveal a unique macrophage-specific and glycolysis-dependent mechanism to modulate immune tumor surveillance and checkpoint blockade. This may contribute to increased cancer risk yet improved response to PD-1 blockade in TAM-enriched tumors and obesity.
 
Overall design To investigate gene expression profile of bead isolated CD11b+ MC38 tumor associated macrophages treated with a-PD1 blocking antibody or IgG control
To investigate gene expression profile between FACS isolated PD-1 high and PD-1 low expressing MC38 TAMs
To investigate PDCD1 expression of healthy donor monocytes enriched from PBMC compared to a PTEN haplodeficient patient monocytes
 
Contributor(s) Jackie B, Xiang Y
Citation(s) 38867043
Submission date Sep 11, 2023
Last update date Jul 19, 2024
Contact name John Karijolich
E-mail(s) john.karijolich@vumc.org
Organization name Vanderbilt University Medical Center
Department PMI
Lab John Karijolich Lab
Street address 1211 Medical Center Drive
City Nashville
State/province TN
ZIP/Postal code 37232
Country USA
 
Platforms (2)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (29)
GSM7771840 MC38 TAM IgG 1
GSM7771841 MC38 TAM IgG 2
GSM7771842 MC38 TAM IgG 3
Relations
BioProject PRJNA1015132

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Supplementary file Size Download File type/resource
GSE242839_9771_SS_gene_count.txt.gz 5.2 Mb (ftp)(http) TXT
GSE242839_PD1_low_high_count.rds.gz 5.1 Mb (ftp)(http) RDS
GSE242839_PD1_treatment_count.rds.gz 4.7 Mb (ftp)(http) RDS
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