The Electron Microscopy Data Bank (EMDB) is a public repository for cryogenic-sample Electron Microscopy (cryoEM) volumes and representative tomograms of macromolecular complexes and subcellular structures. It covers a variety of techniques, including single-particle analysis, helical reconstruction, electron tomography, subtomogram averaging, and electron crystallography. More...
As of 24 July 2024, EMDB contains 37221 entries (latest entries, trends).
EMDB News
-
06 January 2024: We are delighted to share that EMDB has officially been elevated to a Core Data Resource by ELIXIR, recognising it as a European data resource of fundamental importance to the wider life-science community and the long-term preservation of biological data.
-
22 November 2023: We are happy to share the most recent version of the EMDB Nucleic Acids Research paper. The paper describes recent developments and future plans of the EMDB in the context of the worldwide Protein Data Bank. Check it out now! https://doi.org/10.1093/nar/gkad1019
Explore EMDB
Select a graph from the pull-down menu. Click on any element of a graph to see the corresponding list of EMDB entries.
Quick links
Recent Entries
(Show all)80S ribosome with angiogenin, in vitro assembled complex without substrate tRNA
Structure of the flotillin complex in a native membrane environment
Cryo-EM map of LKB1-STRADalpha-MO25alpha from TFS Glacios with Gatan K3 detector at 200 keV
Crosslinked 6-deoxyerythronolide B synthase (DEBS) Module 1 in complex with antibody fragment 1B2: Crosslinked State 1
80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla
Sub-tomogram average of two pairs of RSV F trimers from the surface of native virions released from RSV-infected BEAS-2B cells cultured on EM grids
Cryo-EM structure of the mammalian peptide transporter PepT2 bound to cloxacillin, pose 2
Sub-tomogram average of two pairs of RSV F trimers from the surface of native virions released from RSV-infected BEAS-2B cells cultured on EM grids
Cryo-EM structure of the mammalian peptide transporter PepT2 bound to cloxacillin, pose 1
Cryo-EM structure of the mammalian peptide transporter PepT2 bound to amoxicillin
Cryo-EM structure of heparosan synthase 2 from Pasteurella multocida with polysaccharide in the GlcNAc-T active site
Cryo-EM structure of the mammalian peptide transporter PepT2 bound to cefadroxil
Cryo-EM map of LKB1-STRADalpha-MO25alpha from TFS Glacios with Gatan Alpine detector at 200 keV
Sub-tomogram average of a pair of RSV F trimers from native virions released from RSV-infected BEAS-2B cells cultured on EM grids
CryoEM structure of neutralizing antibodies CBH-7 and HC84.26 in complex with Hepatitis C virus envelope glycoprotein E2
SARS-CoV-2 spike omicron (BA.1) ectodomain trimer in complex with SC27 Fab, local refinement
KS-AT core of 6-deoxyerythronolide B synthase (DEBS) Module 3 crosslinked with its elongation ACP partner
Cryo-EM map of LKB1-STRADalpha-MO25alpha from TFS Glacios with Gatan Alpine detector at 120 keV
Crosslinked 6-deoxyerythronolide B synthase (DEBS) Module 1 in complex with antibody fragment 1B2: Crosslinked Intra-State 1
80S ribosome with angiogenin and ternary complex in rabbit reticulocyte lysates
Cryo-EM structure of human claudin-4 complex with Clostridium perfringens enterotoxin
Cryo-EM structure of Kaposi's Sarcoma-Associated Herpesvirus-G Protein-Coupled Receptor (KSHV-GPCR)in complex with CXC chemokine CXCL1
Cryo-EM structure of the human nucleosome containing the H3.1 E97K mutant
Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex-II (Body 1)
Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex (Body 2)
The Cryo-EM structure of IL-12, receptor subunit beta-1 and receptor subunit beta-2 complex, local refinement
Cryo-EM structure of human nucleosome core particle composed of the Widom 601 DNA sequence
Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex I
Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex (Body 1)
Cryo-EM structure of an active Kaposi's Sarcoma-Associated Herpesvirus-G Protein-Coupled Receptor (KSHV-GPCR) in complex with Gi protein
Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex-II (Body 2)
Cryo-EM structure of Coxsackievirus B1 A-particle in complex with nAb 8A10 (CVB1-A:8A10)
Cryo-EM structure of 30S ribosome with cleaved AP-mRNA bound complex-II
The Cryo-EM structure of IL-12, receptor subunit beta-1 and receptor subunit beta-2 complex
cryo-EM structure of Staphylococcus aureus(ATCC 29213) 70S ribosome in complex with MCX-190.
A local Cryo-EM structure of Bitter taste receptor TAS2R14 with Gi complex
A Cryo-EM structure of Bitter taste receptor TAS2R14 with Gi complex
Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.
Cryo-EM structure of Staphylococcus aureus 70S ribosome (strain 15B196) in complex with MCX-190.
cryo-EM structure of Staphylococcus aureus(ATCC 29213) 50S ribosome in complex with MCX-190.
Structure of heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 2)
Human DNA methyltransferase 1 productive DNA complex in presence of H3Ub2-peptide
Cryo-EM Structure of the R388 plasmid conjugative pilus reveals a helical polymer characterised by an unusual pilin/phospholipid binary complex
Inhibitor-free outward-open structure of Drosophila dopamine transporter
Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6) bound with pre-let7g miRNA and UTPalphaS
70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.
IFTB1 (distal region) in retrograde Intraflagellar transport trains
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture -PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol 30:20:20:30)
IFTB1 (proximal region) in retrograde Intraflagellar transport trains
Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase F397A mutant in complex with NADPH
Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 1
Structure of mammalian Pol II-DSIF-SPT6-PAF1-TFIIS-hexasome elongation complex (Hexasome focused map)
Structure of IFTA and IFTB in Retrograde Intraflagellar transport trains
Stretched state - Native eisosome lattice bound to plasma membrane microdomain
Cryo-EM structure of Streptococcus pneumoniae NADPH oxidase in complex with NADPH
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/+sterol (DOPC, DOPE, DOPS, cholesterol, PI(4,5)P2 35:20:20:15:10)
Compact state - Native eisosome lattice bound to plasma membrane microdomain
Outward-open structure of Drosophila dopamine transporter bound to an atypical non-competitive inhibitor
Structure of activated elongation complex with hexasome (Pol II focused)
Cryo-EM structure of stably reduced Streptococcus pneumoniae NADPH oxidase in complex with NADH
Helical reconstruction of yeast eisosome protein Pil1 bound to membrane composed of lipid mixture +PIP2/-sterol (DOPC, DOPE, DOPS, PI(4,5)P2 50:20:20:10)
Structure of heteromeric amyloid filament of TDP-43 and AXNA11 from FTLD-TDP Type C (variant 1)
Human terminal uridylyltransferase 7 (TUT7/ZCCHC6) bound with pre-let7g miRNA and Lin28A - complex 2
Structure of the non-mitochondrial citrate synthase from Ananas comosus
70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.
Focused refined map of the Anaphase-promoting complex/cyclosome (APC/C) with mask 3
CryoEM map of tau PHF sarkosyl-extracted from a human AD patient (associated with in situ tomography)
Sub-tomogram average of the RSV M lattice from native virions released from RSV-infected BEAS-2B cells cultured on EM grids
SARS-CoV-2 spike omicron (BA.1) RBD ectodomain dimer-of-trimers in complex with SC27 Fabs
Sub-tomogram average of two pairs of RSV F trimers from the surface of native virions released from RSV-infected BEAS-2B cells cultured on EM grids
CryoEM structure of neutralizing antibody HC84.26 in complex with Hepatitis C virus envelope glycoprotein E2